To create a new entry in the elements or mod_bricks sections. The only time this won’t work is if you had edited unimod.xml A few seconds later,Ī new unimod.xml will be created automatically in mascot/config. Your old unimod.xml file to usermod.xml and copy it to mascot/config/unimod, over-writing the existing file. If you have a large number of changes, rename The easiest solution is to re-enter them one final time using the Configuration Editor. If you are updating to Mascot 2.6 from Mascot 2.4 or earlier, and only have a small number of changes to your local list of modifications, (Note that this means you should never edit or update unimod.xml … your changes could When the Mascot Monitor service sees that either file has changed, it merges the two files to createĪ new unimod.xml in the mascot/config directory. Any local changes you make using the Configuration Editor are saved to a separate file called The downloaded file is re-named to master.xml and saved to the The Modifications module of the Configuration Editor has a button (Check Unimod) which looks to see whether a newer This was improved in 2.5 by saving all changes to a separate file and merging this with the downloaded file to create the workingĬopy of unimod.xml. Unsatisfactory aspect of this was that any changes were lost if you downloaded a fresh copy of unimod.xml. This could be done using the Mascot Configuration Editor or, if you were very brave, by editing unimod.xml. In Mascot 2.4 and earlier, if you wanted to change a modification or add a new one, The list of modifications used by Mascot is taken from Unimod by downloading theĭatabase contents in XML format (unimod.xml). perl64/bin/perl disable_ Updating from 2.4 or earlier Installation & setup manual, chapter 12, pages 177-8: The commands to enable and disable security should read: Windows. If you updated a library by accident, please contactĪt NIST for a download link to the old-format MSP files. Library metadata, which contains the modification information. View a match in Peptide Summary to see the full
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